Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01623D-threonine aldolase. (450 aa)    
Predicted Functional Partners:
dan_1
D-aminoacylase.
 
   
 0.962
yabJ_1
Enamine/imine deaminase.
 
   
 0.798
ydaP
Putative thiamine pyrophosphate-containing; Belongs to the TPP enzyme family.
  
    0.785
poxB
Pyruvate dehydrogenase [ubiquinone]; Belongs to the TPP enzyme family.
  
    0.785
T45_09038
Putative FAD-linked oxidoreductase.
  
 
  0.759
kdgR_2
Transcriptional regulator KdgR.
       0.757
kdgK_3
2-dehydro-3-deoxygluconokinase.
 
     0.653
pucG
Purine catabolism protein PucG.
    
  0.541
gcl
Glyoxylate carboligase; Belongs to the TPP enzyme family.
  
  
  0.539
ghrB_3
Glyoxylate/hydroxypyruvate reductase B; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
 0.522
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.