Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mngR_1mannosyl-D-glycerate transport/metabolism system. (250 aa)    
Predicted Functional Partners:
T45_01722
Hypothetical protein.
       0.725
T45_01724
Hypothetical protein.
  
    0.693
nudG_1
CTP pyrophosphohydrolase; Belongs to the Nudix hydrolase family.
  
    0.655
yvoA_6
HTH-type transcriptional repressor YvoA.
  
     0.633
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
  0.621
T45_01726
Hypothetical protein.
 
     0.602
T45_05789
Hypothetical protein.
  
     0.579
T45_06777
Hypothetical protein.
  
     0.497
T45_06938
Hypothetical protein.
       0.496
gmuR_2
HTH-type transcriptional regulator GmuR.
  
     0.489
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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