Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sdhA_2Succinate dehydrogenase flavoprotein subunit. (646 aa)    
Predicted Functional Partners:
sdhB_2
Succinate dehydrogenase iron-sulfur subunit.
 
 0.998
sdhB_1
Succinate dehydrogenase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 0.990
sdhC
Succinate dehydrogenase/Fumarate reductase.
 
 0.986
T45_01505
Succinate dehydrogenase cytochrome b556 small.
 
 0.982
T45_01733
Hypothetical protein.
 
 
 
 0.981
T45_05062
Succinate dehydrogenase/Fumarate reductase.
  
 0.979
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
 
 0.968
frdB
Fumarate reductase iron-sulfur subunit.
  
 0.967
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 0.962
fumC
Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
 
 0.958
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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