STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_01752Phosphotransferase enzyme family protein. (247 aa)    
Predicted Functional Partners:
T45_00723
Phosphotransferase enzyme family protein.
 
     0.557
T45_00820
FtsX-like permease family protein.
  
    0.481
speG_1
Spermidine N(1)-acetyltransferase.
   
   0.475
T45_02257
Helix-turn-helix domain protein.
  
     0.453
T45_06601
Cellulase (glycosyl hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.452
T45_04319
Pyridoxamine 5'-phosphate oxidase.
  
     0.417
T45_06436
Putative polyketide cyclase.
  
     0.406
T45_09057
Hypothetical protein.
  
 
   0.406
T45_06409
FG-GAP repeat protein.
  
     0.405
T45_03033
Putative polyketide cyclase.
  
     0.404
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.