STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drrA_4Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. (315 aa)    
Predicted Functional Partners:
T45_01762
ABC-2 family transporter protein.
 
 
 0.975
desK_4
Sensor histidine kinase DesK.
 
    0.858
degU_3
Transcriptional regulatory protein DegU.
 
     0.844
T45_01760
Hypothetical protein.
 
     0.779
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.689
mshB_2
1D-myo-inositol; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway.
       0.661
T45_01759
Hypothetical protein.
       0.661
desK_1
Sensor histidine kinase DesK.
 
    0.654
T45_01102
ABC-2 family transporter protein.
  
  0.616
T45_01359
ABC-2 family transporter protein.
  
  0.616
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.