sigE_7 protein (Streptomyces turgidiscabies)

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Score

sigE_7

ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily. (219 aa)

Predicted Functional Partners:

T45_01780

0.906

carD

0.846

rpoC

0.846

rpoB_1

0.846

rpoZ

0.753

rpoA_1

0.702

rpoA_2

0.702

tatB

0.645

htrA_2

0.637

sigD_4

0.615

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_01780	htrA_2	T45_01780	T45_01781	Hypothetical protein.	Serine protease Do-like HtrA.	0.555
T45_01780	sigE_7	T45_01780	T45_01779	Hypothetical protein.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.906
T45_01780	tatB	T45_01780	T45_01782	Hypothetical protein.	Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.	0.693
carD	rpoA_1	T45_06076	T45_04383	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.902
carD	rpoA_2	T45_06076	T45_08564	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.901
carD	rpoB_1	T45_06076	T45_07178	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.948
carD	rpoC	T45_06076	T45_07177	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
carD	rpoZ	T45_06076	T45_08441	RNA polymerase-binding transcription factor.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.961
carD	sigE_7	T45_06076	T45_01779	RNA polymerase-binding transcription factor.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.846
htrA_2	T45_01780	T45_01781	T45_01780	Serine protease Do-like HtrA.	Hypothetical protein.	0.555
htrA_2	sigE_7	T45_01781	T45_01779	Serine protease Do-like HtrA.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.637
htrA_2	tatB	T45_01781	T45_01782	Serine protease Do-like HtrA.	Sec-independent translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.	0.572
rpoA_1	carD	T45_04383	T45_06076	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase-binding transcription factor.	0.902
rpoA_1	rpoB_1	T45_04383	T45_07178	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA_1	rpoC	T45_04383	T45_07177	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
rpoA_1	rpoZ	T45_04383	T45_08441	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.997
rpoA_1	sigD_4	T45_04383	T45_07371	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigD; Belongs to the sigma-70 factor family. ECF subfamily.	0.791
rpoA_1	sigE_7	T45_04383	T45_01779	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	ECF RNA polymerase sigma factor SigE; Belongs to the sigma-70 factor family. ECF subfamily.	0.702
rpoA_2	carD	T45_08564	T45_06076	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase-binding transcription factor.	0.901
rpoA_2	rpoB_1	T45_08564	T45_07178	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997

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