Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01790Suppressor of fused protein (SUFU). (201 aa)    
Predicted Functional Partners:
T45_04010
ABC-2 type transporter.
  
     0.609
T45_06090
Hypothetical protein.
  
     0.585
T45_00658
Hypothetical protein.
  
     0.580
T45_02489
Hypothetical protein.
  
     0.568
T45_06754
Peptidase family M48.
  
     0.547
T45_07987
Hypothetical protein.
  
     0.547
doxX_1
DoxX.
  
     0.540
T45_08150
Hypothetical protein.
  
     0.533
T45_07947
ABC transporter ATP-binding/permease protein.
  
     0.531
T45_08434
Hypothetical protein.
  
     0.527
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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