Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01803Hypothetical protein. (80 aa)    
Predicted Functional Partners:
carC_1
2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoate hydrolase.
       0.750
ttgW_1
Putative HTH-type transcriptional regulator.
       0.721
T45_01805
Hypothetical protein.
       0.652
T45_01801
Hypothetical protein.
       0.651
T45_01800
Hypothetical protein.
       0.605
glgA_1
Capsular glucan synthase.
       0.581
T45_01811
Hypothetical protein.
       0.581
tal_2
DTDP-6-deoxy-L-talose 4-dehydrogenase.
       0.573
moeZ
Putative adenylyltransferase/sulfurtransferase.
       0.480
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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