Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01805Hypothetical protein. (406 aa)    
Predicted Functional Partners:
dhbF_8
Dimodular nonribosomal peptide synthase.
    
 0.802
fas6_1
LOG family protein ORF6 in fasciation locus.
    
 0.760
T45_06353
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
    
 0.760
carC_1
2-hydroxy-6-oxo-6-(2'-aminophenyl)hexa-2, 4-dienoate hydrolase.
       0.712
T45_01803
Hypothetical protein.
       0.652
glgA_1
Capsular glucan synthase.
       0.626
T45_01811
Hypothetical protein.
       0.626
T45_01801
Hypothetical protein.
  
    0.622
ttgW_1
Putative HTH-type transcriptional regulator.
       0.608
ppsA
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
    
 0.607
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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