Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
ubiBPutative protein kinase UbiB. (454 aa)    
Predicted Functional Partners:
T45_03938
Polyketide cyclase / dehydrase and lipid transport.
  
 
 
 0.900
T45_01829
ThiF family protein.
       0.873
clgR_3
Transcriptional regulator ClgR.
  
     0.728
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.715
namA
NADPH dehydrogenase.
   
 0.714
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.686
T45_06556
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
     0.679
T45_00786
Cell division inhibitor MinD.
  
     0.677
estB_4
Extracellular esterase EstB precursor.
 
 
   0.677
T45_03900
Putative S-adenosyl-L-methionine-dependent methyltransferase.
  
 
 0.672
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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