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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubiBPutative protein kinase UbiB. (454 aa)    
Predicted Functional Partners:
T45_01829
ThiF family protein.
       0.884
T45_03938
Polyketide cyclase / dehydrase and lipid transport.
  
 
 
 0.856
clgR_3
Transcriptional regulator ClgR.
  
     0.728
T45_01830
SprT-like family protein.
       0.694
T45_06556
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
     0.679
T45_00786
Cell division inhibitor MinD.
  
     0.677
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
  
 0.669
arsA_1
Arsenical pump-driving ATPase.
  
     0.662
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
 0.650
bpoC_2
Putative non-heme bromoperoxidase BpoC.
  
  
 0.613
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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