Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_01853Alpha/beta hydrolase family protein. (223 aa)    
Predicted Functional Partners:
yedK
Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.
       0.873
thiD
Hydroxymethylpyrimidine/phosphomethylpyrimidine.
  
    0.771
sigR
ECF RNA polymerase sigma factor SigR; Belongs to the sigma-70 factor family. ECF subfamily.
       0.761
rsrA
Anti-sigma factor RsrA.
       0.761
T45_01851
Hypothetical protein.
       0.703
T45_09302
Hypothetical protein.
   
    0.678
aroA_1
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.640
rsgA_1
Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
       0.636
sugE
Quaternary ammonium compound-resistance protein.
       0.607
T45_08958
Hypothetical protein.
    
  0.554
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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