Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01873Hypothetical protein. (92 aa)    
Predicted Functional Partners:
yodF_1
Putative symporter YodF; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
   
 0.951
yodF_2
Putative symporter YodF; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
   
 0.786
dasR_1
HTH-type transcriptional repressor DasR.
       0.735
nrdB
Ribonucleoside-diphosphate reductase subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.687
nrdZ
Ribonucleoside-diphosphate reductase NrdZ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
       0.687
ydjE
Inner membrane metabolite transport protein.
  
     0.550
plcN
Non-hemolytic phospholipase C precursor.
  
     0.548
malE
Maltose-binding periplasmic protein precursor.
       0.519
ycjO_1
Inner membrane ABC transporter permease protein.
       0.519
ybbD_1
Putative lipoprotein YbbD precursor.
       0.519
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.