Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dasR_1HTH-type transcriptional repressor DasR. (254 aa)    
Predicted Functional Partners:
mngR_2
mannosyl-D-glycerate transport/metabolism system.
  
     0.760
yurK_1
Putative HTH-type transcriptional regulator.
  
     0.753
yurK_3
Putative HTH-type transcriptional regulator.
  
     0.752
T45_01873
Hypothetical protein.
       0.735
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.
     
 0.731
yegW
Putative HTH-type transcriptional regulator.
  
     0.728
yvoA_1
HTH-type transcriptional repressor YvoA.
  
     0.720
yvoA_4
HTH-type transcriptional repressor YvoA.
  
     0.716
yvoA_9
HTH-type transcriptional repressor YvoA.
  
     0.657
nrdB
Ribonucleoside-diphosphate reductase subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
       0.631
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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