Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_01620 | T45_01879 | T45_01620 | T45_01879 | Glucan endo-1,3-beta-glucosidase precursor. | Glyoxalase-like domain protein. | 0.684 |
T45_01620 | T45_02914 | T45_01620 | T45_02914 | Glucan endo-1,3-beta-glucosidase precursor. | Hypothetical protein. | 0.754 |
T45_01620 | T45_04651 | T45_01620 | T45_04651 | Glucan endo-1,3-beta-glucosidase precursor. | Hypothetical protein. | 0.758 |
T45_01620 | T45_08983 | T45_01620 | T45_08983 | Glucan endo-1,3-beta-glucosidase precursor. | Hypothetical protein. | 0.765 |
T45_01620 | celD | T45_01620 | T45_02594 | Glucan endo-1,3-beta-glucosidase precursor. | Endoglucanase E-4 precursor. | 0.746 |
T45_01879 | T45_01620 | T45_01879 | T45_01620 | Glyoxalase-like domain protein. | Glucan endo-1,3-beta-glucosidase precursor. | 0.684 |
T45_01879 | T45_02914 | T45_01879 | T45_02914 | Glyoxalase-like domain protein. | Hypothetical protein. | 0.645 |
T45_01879 | T45_04651 | T45_01879 | T45_04651 | Glyoxalase-like domain protein. | Hypothetical protein. | 0.597 |
T45_01879 | T45_08983 | T45_01879 | T45_08983 | Glyoxalase-like domain protein. | Hypothetical protein. | 0.685 |
T45_01879 | baeB_1 | T45_01879 | T45_03748 | Glyoxalase-like domain protein. | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | 0.831 |
T45_01879 | baeB_2 | T45_01879 | T45_07597 | Glyoxalase-like domain protein. | Putative polyketide biosynthesis zinc-dependent hydrolase BaeB. | 0.831 |
T45_01879 | celD | T45_01879 | T45_02594 | Glyoxalase-like domain protein. | Endoglucanase E-4 precursor. | 0.638 |
T45_01879 | maoI | T45_01879 | T45_02686 | Glyoxalase-like domain protein. | Primary amine oxidase precursor. | 0.909 |
T45_01879 | nagB | T45_01879 | T45_01880 | Glyoxalase-like domain protein. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.658 |
T45_01879 | ssrA | T45_01879 | T45_07415 | Glyoxalase-like domain protein. | Glucan endo-1,3-beta-glucosidase precursor. | 0.663 |
T45_02914 | T45_01620 | T45_02914 | T45_01620 | Hypothetical protein. | Glucan endo-1,3-beta-glucosidase precursor. | 0.754 |
T45_02914 | T45_01879 | T45_02914 | T45_01879 | Hypothetical protein. | Glyoxalase-like domain protein. | 0.645 |
T45_02914 | T45_04651 | T45_02914 | T45_04651 | Hypothetical protein. | Hypothetical protein. | 0.770 |
T45_02914 | T45_08983 | T45_02914 | T45_08983 | Hypothetical protein. | Hypothetical protein. | 0.768 |
T45_02914 | celD | T45_02914 | T45_02594 | Hypothetical protein. | Endoglucanase E-4 precursor. | 0.724 |
page 1 of 3