Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_01890 | T45_01891 | T45_01890 | T45_01891 | N-acetylmuramoyl-L-alanine amidase. | Hypothetical protein. | 0.702 |
T45_01890 | dcyD | T45_01890 | T45_01889 | N-acetylmuramoyl-L-alanine amidase. | D-cysteine desulfhydrase. | 0.754 |
T45_01890 | glsA | T45_01890 | T45_07097 | N-acetylmuramoyl-L-alanine amidase. | Thermolabile glutaminase; Belongs to the glutaminase family. | 0.483 |
T45_01891 | T45_01890 | T45_01891 | T45_01890 | Hypothetical protein. | N-acetylmuramoyl-L-alanine amidase. | 0.702 |
T45_01891 | T45_01893 | T45_01891 | T45_01893 | Hypothetical protein. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.484 |
T45_01891 | T45_02645 | T45_01891 | T45_02645 | Hypothetical protein. | Helix-turn-helix domain protein. | 0.499 |
T45_01891 | dcyD | T45_01891 | T45_01889 | Hypothetical protein. | D-cysteine desulfhydrase. | 0.670 |
T45_01891 | glsA | T45_01891 | T45_07097 | Hypothetical protein. | Thermolabile glutaminase; Belongs to the glutaminase family. | 0.550 |
T45_01891 | mmpI_1 | T45_01891 | T45_01892 | Hypothetical protein. | Major membrane protein I. | 0.485 |
T45_01893 | T45_01891 | T45_01893 | T45_01891 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Hypothetical protein. | 0.484 |
T45_01893 | dcyD | T45_01893 | T45_01889 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | D-cysteine desulfhydrase. | 0.686 |
T45_01893 | mmpI_1 | T45_01893 | T45_01892 | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | Major membrane protein I. | 0.905 |
T45_02645 | T45_01891 | T45_02645 | T45_01891 | Helix-turn-helix domain protein. | Hypothetical protein. | 0.499 |
T45_02645 | glsA | T45_02645 | T45_07097 | Helix-turn-helix domain protein. | Thermolabile glutaminase; Belongs to the glutaminase family. | 0.550 |
dcyD | T45_01890 | T45_01889 | T45_01890 | D-cysteine desulfhydrase. | N-acetylmuramoyl-L-alanine amidase. | 0.754 |
dcyD | T45_01891 | T45_01889 | T45_01891 | D-cysteine desulfhydrase. | Hypothetical protein. | 0.670 |
dcyD | T45_01893 | T45_01889 | T45_01893 | D-cysteine desulfhydrase. | (2E,6E)-farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.686 |
dcyD | glsA | T45_01889 | T45_07097 | D-cysteine desulfhydrase. | Thermolabile glutaminase; Belongs to the glutaminase family. | 0.428 |
glsA | T45_01890 | T45_07097 | T45_01890 | Thermolabile glutaminase; Belongs to the glutaminase family. | N-acetylmuramoyl-L-alanine amidase. | 0.483 |
glsA | T45_01891 | T45_07097 | T45_01891 | Thermolabile glutaminase; Belongs to the glutaminase family. | Hypothetical protein. | 0.550 |
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