Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01952Hypothetical protein. (184 aa)    
Predicted Functional Partners:
T45_01949
Hypothetical protein.
       0.821
ftsW_3
Lipid II flippase FtsW; Belongs to the SEDS family.
       0.821
T45_01954
Hypothetical protein.
       0.781
pbpA_2
Penicillin-binding protein A.
    
  0.776
cseC_1
Sensor protein CseC.
       0.617
T45_01955
Dual specificity phosphatase, catalytic domain.
       0.519
T45_01956
Hypothetical protein.
       0.519
lytC
N-acetylmuramoyl-L-alanine amidase LytC.
     
  0.499
dacB
D-alanyl-D-alanine carboxypeptidase DacB.
     
  0.495
T45_01036
Putative peptidoglycan binding domain protein.
    
  0.483
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.