STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_01952Hypothetical protein. (184 aa)    
Predicted Functional Partners:
T45_01949
Hypothetical protein.
       0.835
ftsW_3
Lipid II flippase FtsW; Belongs to the SEDS family.
       0.835
T45_01954
Hypothetical protein.
       0.797
pbpA_2
Penicillin-binding protein A.
       0.707
cseC_1
Sensor protein CseC.
       0.633
T45_01955
Dual specificity phosphatase, catalytic domain.
       0.550
T45_01956
Hypothetical protein.
       0.550
T45_01947
P-aminobenzoate N-oxygenase AurF.
       0.497
T45_01036
Putative peptidoglycan binding domain protein.
    
 0.453
T45_01210
Hypothetical protein.
    
 0.420
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.