Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ubiG_1Ubiquinone biosynthesis O-methyltransferase. (382 aa)    
Predicted Functional Partners:
pks2
Phthioceranic/hydroxyphthioceranic acid.
 
 
 0.926
T45_01969
Acyl carrier protein.
 
    0.920
rebG
4'-demethylrebeccamycin synthase.
 
     0.914
ppsC_3
Phthiocerol synthesis polyketide synthase type I.
 
    0.913
cpo_1
Non-heme chloroperoxidase.
 
     0.875
mlr_1
4-methylaminobutanoate oxidase; Belongs to the GcvT family.
   
 0.795
bchI
Magnesium-chelatase 38 kDa subunit.
  
 0.762
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.737
T45_01858
Hypothetical protein.
  
     0.669
prpE
Bis(5'-nucleosyl)-tetraphosphatase PrpE.
 
 
   0.664
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.