Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
ysnEPutative N-acetyltransferase YsnE. (177 aa)    
Predicted Functional Partners:
ssuD_1
Alkanesulfonate monooxygenase.
 
     0.903
fliY
Cystine-binding periplasmic protein precursor.
 
     0.887
ssuE
FMN reductase (NADPH).
     0.841
tcyC_2
L-cystine import ATP-binding protein TcyC.
 
     0.771
yecS_2
Inner membrane amino-acid ABC transporter permease protein YecS.
     0.764
T45_03554
Hypothetical protein.
  
     0.668
fgd1_7
F420-dependent glucose-6-phosphate dehydrogenase.
       0.499
T45_00095
Hypothetical protein.
  
     0.482
T45_02817
SnoaL-like domain protein.
  
     0.414
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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