Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_01988Hypothetical protein. (69 aa)    
Predicted Functional Partners:
T45_01386
Helix-turn-helix domain protein.
 
   
 0.803
T45_02004
Helix-turn-helix domain protein.
 
   
 0.803
T45_05584
Helix-turn-helix domain protein.
 
   
 0.803
T45_05145
Hypothetical protein.
  
     0.644
T45_02251
Hypothetical protein.
  
     0.628
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
  0.620
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.551
T45_04834
Hypothetical protein.
  
     0.534
T45_01987
3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase.
       0.526
T45_03771
Hypothetical protein.
  
     0.500
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.