Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
etpLow molecular weight; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (226 aa)    
Predicted Functional Partners:
ywlC
threonylcarbamoyl-AMP synthase; Belongs to the SUA5 family.
       0.873
ptpA_1
Putative low molecular weight protein-tyrosine-phosphatase.
  
  
  0.867
prmC_1
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.793
epsL
Putative sugar transferase EpsL.
  
 
 0.773
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
 
 0.772
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.760
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
  
    0.723
baeB_1
Putative polyketide biosynthesis zinc-dependent hydrolase BaeB.
   
 
 0.693
baeB_2
Putative polyketide biosynthesis zinc-dependent hydrolase BaeB.
   
 
 0.693
bfrA
Beta-fructosidase.
  
 
 0.668
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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