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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02054Putative GTPase/MT1543. (318 aa)    
Predicted Functional Partners:
scpA_3
methylmalonyl-CoA mutase.
  
 0.975
mutB_1
methylmalonyl-CoA mutase large subunit.
  
 0.961
mutB_2
methylmalonyl-CoA mutase large subunit.
  
 0.960
mutA
methylmalonyl-CoA mutase small subunit.
 
  
 0.944
mce
Glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein.
 
     0.931
scpA_5
methylmalonyl-CoA mutase.
  
 0.930
scpA_4
methylmalonyl-CoA mutase.
  
 0.925
scpA_1
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
0.839
T45_02053
Putative acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.813
T45_02055
Major Facilitator Superfamily protein.
       0.733
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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