Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
T45_02134Amidohydrolase. (397 aa)    
Predicted Functional Partners:
mmgC_2
acyl-CoA dehydrogenase.
 
     0.883
Acd_1
glutaryl-CoA dehydrogenase.
 
     0.834
fadK_1
short-chain-fatty-acid--CoA ligase.
 
     0.789
T45_02944
Hypothetical protein.
  
     0.713
T45_05284
Hypothetical protein.
  
     0.699
T45_02954
Hypothetical protein.
 
     0.692
T45_02117
Hypothetical protein.
  
     0.681
subB_1
Ferredoxin-2.
  
     0.615
nfdA_4
N-substituted formamide deformylase precursor.
  
     0.611
T45_05251
Lipid-transfer protein.
  
     0.609
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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