Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
vapB5Putative antitoxin VapB5; Antitoxin component of a type II toxin-antitoxin (TA) system. (91 aa)    
Predicted Functional Partners:
vapC5
Ribonuclease VapC5.
 
 
 
 0.994
T45_03772
Hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.612
vapC
Ribonuclease VapC21; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
   
 
 0.605
vapC-2
Ribonuclease VapC21; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
   
 
 0.605
yhjX_1
Putative MFS-type transporter YhjX.
       0.590
T45_04181
Hypothetical protein.
  
     0.537
T45_09218
Transposase DDE domain protein.
  
     0.535
T45_06891
Transposase DDE domain protein.
  
     0.526
T45_02582
Hypothetical protein.
  
     0.518
cdhR_2
HTH-type transcriptional regulator CdhR.
 
     0.508
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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