STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaG_21,2-epoxyphenylacetyl-CoA isomerase. (304 aa)    
Predicted Functional Partners:
barA_2
Signal transduction histidine-protein kinase.
   
 0.984
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
   
 0.969
caiD_4
carnitinyl-CoA dehydratase.
 
  
0.922
echA8_8
Putative enoyl-CoA hydratase echA8.
 
  
0.920
echA8_3
Putative enoyl-CoA hydratase echA8.
 
  
0.917
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
 
 0.914
paaG_1
1,2-epoxyphenylacetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 
0.912
paaA
1,2-phenylacetyl-CoA epoxidase, subunit A.
 
 
  0.911
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
  
 
 0.902
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
  
 
 0.901
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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