STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
drrA_7Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. (323 aa)    
Predicted Functional Partners:
drrB_3
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
  
 0.975
drrB_5
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 
 0.847
drrB_6
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 
 0.846
drrB_1
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
  
  0.845
drrB_4
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
 
 0.845
drrB_2
Daunorubicin/doxorubicin resistance ABC transporter permease protein DrrB.
 
  
 0.820
T45_00913
Hypothetical protein.
 
 
 0.728
rbsA_6
Ribose import ATP-binding protein RbsA; Belongs to the binding-protein-dependent transport system permease family.
    
  0.660
cydD
ATP-binding/permease protein CydD.
     
  0.598
T45_08286
ABC-2 type transporter.
 
 
 0.592
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.