Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
hpxO_1FAD-dependent urate hydroxylase. (377 aa)    
Predicted Functional Partners:
tetR_1
Tetracycline repressor protein class H.
 
   
 0.912
bphC_1
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
 
  
 0.609
hpxO_2
FAD-dependent urate hydroxylase.
  
     0.585
ubiE_9
Demethylmenaquinone methyltransferase.
 
 
 0.583
T45_01957
Methyltransferase domain protein.
 
 
  0.574
puuB_1
Gamma-glutamylputrescine oxidoreductase.
   
 
 0.563
pobB
Phenoxybenzoate dioxygenase subunit beta.
  
  
 0.546
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
  
  
 0.535
mhbM
3-hydroxybenzoate 6-hydroxylase.
  
     0.532
pcaH
Protocatechuate 3,4-dioxygenase beta chain.
  
 
 0.519
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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