Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
limB_1Limonene 1,2-monooxygenase. (372 aa)    
Predicted Functional Partners:
dan_2
D-aminoacylase.
 
     0.820
geoB_2
Geranial dehydrogenase.
       0.746
T45_02200
Amidohydrolase.
 
     0.627
T45_02163
DNA-binding transcriptional repressor FabR.
  
     0.622
T45_07664
Bacterial regulatory proteins, tetR family.
  
     0.602
T45_02117
Hypothetical protein.
  
     0.601
T45_01069
Hypothetical protein.
  
     0.586
T45_03221
Hypothetical protein.
  
     0.578
ssuE
FMN reductase (NADPH).
  
  0.561
narB_2
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
  0.541
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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