Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_02244Hypothetical protein. (181 aa)    
Predicted Functional Partners:
yrrB
TPR repeat-containing protein YrrB.
       0.673
draG_1
ADP-ribosyl-[dinitrogen reductase].
       0.613
T45_04719
Pectate lyase superfamily protein.
  
     0.577
T45_01114
Hypothetical protein.
  
     0.549
T45_07051
Translocation protein TolB.
  
     0.534
T45_02245
Hypothetical protein.
       0.530
leuO
HTH-type transcriptional regulator LeuO; Belongs to the LysR transcriptional regulatory family.
  
     0.506
T45_08364
Phosphotransferase enzyme family protein.
  
     0.499
T45_02278
Putative prophage phiRv2 integrase; Belongs to the 'phage' integrase family.
  
     0.483
T45_04861
Fungal chitosanase.
  
     0.483
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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