Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_02258Major Facilitator Superfamily protein. (405 aa)    
Predicted Functional Partners:
T45_02257
Helix-turn-helix domain protein.
 
     0.906
gpx2
Hydroperoxy fatty acid reductase gpx2; Belongs to the glutathione peroxidase family.
       0.602
xlnA_2
Endo-1,4-beta-xylanase A precursor.
  
     0.527
wapA_1
tRNA(Glu)-specific nuclease WapA precursor.
  
     0.520
wapA_10
tRNA nuclease WapA precursor.
  
     0.504
T45_02218
Glucan endo-1,3-beta-glucosidase precursor.
  
     0.499
wapA_2
tRNA nuclease WapA precursor.
  
     0.497
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.484
msbA_1
Lipid A export ATP-binding/permease protein.
       0.468
T45_07450
Hypothetical protein.
  
     0.435
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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