Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
T45_02262 | T45_02263 | T45_02262 | T45_02263 | 5'-nucleotidase. | Pyridoxamine 5'-phosphate oxidase. | 0.532 |
T45_02262 | T45_06465 | T45_02262 | T45_06465 | 5'-nucleotidase. | Hypothetical protein. | 0.546 |
T45_02262 | cmk | T45_02262 | T45_03567 | 5'-nucleotidase. | Cytidylate kinase. | 0.569 |
T45_02262 | dut | T45_02262 | T45_05454 | 5'-nucleotidase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.566 |
T45_02262 | mtnP | T45_02262 | T45_02397 | 5'-nucleotidase. | S-methyl-5'-thioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage. | 0.517 |
T45_02262 | punA | T45_02262 | T45_01561 | 5'-nucleotidase. | Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.517 |
T45_02262 | tdk | T45_02262 | T45_05438 | 5'-nucleotidase. | Thymidine kinase. | 0.573 |
T45_02262 | thyX | T45_02262 | T45_08112 | 5'-nucleotidase. | Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant. | 0.573 |
T45_02262 | tmk | T45_02262 | T45_00750 | 5'-nucleotidase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.499 |
T45_02262 | udp | T45_02262 | T45_03417 | 5'-nucleotidase. | Uridine phosphorylase. | 0.557 |
T45_02263 | T45_02262 | T45_02263 | T45_02262 | Pyridoxamine 5'-phosphate oxidase. | 5'-nucleotidase. | 0.532 |
T45_06465 | T45_02262 | T45_06465 | T45_02262 | Hypothetical protein. | 5'-nucleotidase. | 0.546 |
T45_06465 | dut | T45_06465 | T45_05454 | Hypothetical protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.665 |
cmk | T45_02262 | T45_03567 | T45_02262 | Cytidylate kinase. | 5'-nucleotidase. | 0.569 |
cmk | dut | T45_03567 | T45_05454 | Cytidylate kinase. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.516 |
cmk | tmk | T45_03567 | T45_00750 | Cytidylate kinase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.529 |
dut | T45_02262 | T45_05454 | T45_02262 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 5'-nucleotidase. | 0.566 |
dut | T45_06465 | T45_05454 | T45_06465 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Hypothetical protein. | 0.665 |
dut | cmk | T45_05454 | T45_03567 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Cytidylate kinase. | 0.516 |
dut | tdk | T45_05454 | T45_05438 | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | Thymidine kinase. | 0.990 |
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