Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
T45_02270Saccharopine dehydrogenase. (349 aa)    
Predicted Functional Partners:
cdhR_3
HTH-type transcriptional regulator CdhR.
 
    0.683
T45_05859
Putative glutaredoxin.1/MT3292.
  
 
   0.606
T45_02168
Putative HTH-type transcriptional.
  
    0.598
ycgE
HTH-type transcriptional repressor YcgE.
  
     0.571
inhA_2
Enoyl-[acyl-carrier-protein] reductase [NADH].
      
 0.550
acpM
Meromycolate extension acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
      
 0.524
rebM_2
demethylrebeccamycin-D-glucose O-methyltransferase.
   
    0.515
T45_01907
Hypothetical protein.
   
    0.515
T45_01823
Putative glutaredoxin.1/MT3292.
    
   0.491
T45_06560
Hypothetical protein.
    
   0.491
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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