Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
T45_02344IS2 transposase TnpB. (177 aa)    
Predicted Functional Partners:
T45_02343
Transposase.
 
  
 0.893
T45_09364
Transposase.
 
  
 0.806
T45_09196
Transposase, Mutator family; Required for the transposition of the insertion element.
 
     0.526
T45_08493
Transposase.
 
  
 0.515
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.491
T45_06183
Transposase.
 
     0.468
T45_07579
Transposase, Mutator family; Required for the transposition of the insertion element.
 
     0.459
T45_08445
Hypothetical protein.
 
   
 0.412
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.