Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gntT_1High-affinity gluconate transporter. (445 aa)    
Predicted Functional Partners:
gudD
Glucarate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
     0.761
fruA
PTS system fructose-specific EIIABC component.
     
 0.610
garK
Glycerate 2-kinase; Belongs to the glycerate kinase type-1 family.
 
  
 0.608
xylB_4
Xylulose kinase; Belongs to the FGGY kinase family.
 
  
 0.541
T45_02372
Putative 5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
       0.528
gntK
Thermoresistant gluconokinase.
 
  
 0.493
vgb_2
Virginiamycin B lyase.
  
  
 0.434
gnd_1
6-phosphogluconate dehydrogenase.
 
  
 0.433
gnd_4
6-phosphogluconate dehydrogenase.
 
  
 0.433
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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