T45_02424 protein (Streptomyces turgidiscabies)

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Score

T45_02424

Hypothetical protein. (281 aa)

Predicted Functional Partners:

rpmC

0.829

rpsS

0.804

rpsC

0.792

rplW

0.792

T45_02425

0.784

rpsE

0.774

T45_07276

0.774

rplR

0.771

rpsQ

0.760

T45_04157

0.759

Your Current Organism:

Streptomyces turgidiscabies

NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T45_02424	T45_02425	T45_02424	T45_02425	Hypothetical protein.	Hypothetical protein.	0.784
T45_02424	T45_04157	T45_02424	T45_04157	Hypothetical protein.	Hypothetical protein.	0.759
T45_02424	T45_07276	T45_02424	T45_07276	Hypothetical protein.	Helix-turn-helix protein.	0.774
T45_02424	rplR	T45_02424	T45_04395	Hypothetical protein.	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.771
T45_02424	rplW	T45_02424	T45_04409	Hypothetical protein.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.792
T45_02424	rpmC	T45_02424	T45_04403	Hypothetical protein.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.829
T45_02424	rpsC	T45_02424	T45_04405	Hypothetical protein.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.792
T45_02424	rpsE	T45_02424	T45_04394	Hypothetical protein.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.774
T45_02424	rpsQ	T45_02424	T45_04402	Hypothetical protein.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.760
T45_02424	rpsS	T45_02424	T45_04407	Hypothetical protein.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.804
T45_02425	T45_02424	T45_02425	T45_02424	Hypothetical protein.	Hypothetical protein.	0.784
T45_04157	T45_02424	T45_04157	T45_02424	Hypothetical protein.	Hypothetical protein.	0.759
T45_07276	T45_02424	T45_07276	T45_02424	Helix-turn-helix protein.	Hypothetical protein.	0.774
rplR	T45_02424	T45_04395	T45_02424	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Hypothetical protein.	0.771
rplR	rplW	T45_04395	T45_04409	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplR	rpmC	T45_04395	T45_04403	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.	0.999
rplR	rpsC	T45_04395	T45_04405	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplR	rpsE	T45_04395	T45_04394	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplR	rpsQ	T45_04395	T45_04402	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rplR	rpsS	T45_04395	T45_04407	50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.999