STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecfA3Energy-coupling factor transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. (264 aa)    
Predicted Functional Partners:
nikQ
Nickel transport protein NikQ.
 0.999
nikMN
Fused nickel transport protein NikMN.
 
 0.999
bioY2
Biotin transporter BioY2.
   
 0.998
ecfT
Energy-coupling factor transporter transmembrane protein.
  
 0.996
nasF_1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
    
 0.872
ykoD
Putative HMP/thiamine import ATP-binding protein.
 
 
0.844
cbiH
cobalt-precorrin-3B C(17-methyltransferase.
  
 
 0.841
T45_02439
Streptomyces sporulation and cell division protein.
       0.772
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
  
 0.744
cbiX_3
Sirohydrochlorin cobaltochelatase.
    
 0.742
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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