STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nikQNickel transport protein NikQ. (253 aa)    
Predicted Functional Partners:
ecfA3
Energy-coupling factor transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 0.999
nikMN
Fused nickel transport protein NikMN.
 
 0.999
T45_00048
Hypothetical protein.
  
 0.991
bioY2
Biotin transporter BioY2.
  
 0.985
ykoD
Putative HMP/thiamine import ATP-binding protein.
  
 0.887
gsiA_1
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.887
gsiA_2
Glutathione import ATP-binding protein GsiA.
  
 0.887
gsiA_3
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.887
gsiA_4
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.887
cbiH
cobalt-precorrin-3B C(17-methyltransferase.
  
  
 0.824
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.