Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
nikMNFused nickel transport protein NikMN. (356 aa)    
Predicted Functional Partners:
nikQ
Nickel transport protein NikQ.
 
 
 0.999
ecfA3
Energy-coupling factor transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 0.997
cbiH
cobalt-precorrin-3B C(17-methyltransferase.
  
  
 0.930
ecfT
Energy-coupling factor transporter transmembrane protein.
  
 
 0.905
T45_02439
Streptomyces sporulation and cell division protein.
       0.754
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.753
ohrR_1
Organic hydroperoxide resistance transcriptional regulator.
       0.692
nasF_1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
 
   
 0.691
cobH
precorrin-8X methylmutase.
 
 
 0.626
T45_00048
Hypothetical protein.
  
 
 0.611
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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