STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nikMNFused nickel transport protein NikMN. (356 aa)    
Predicted Functional Partners:
ecfA3
Energy-coupling factor transporter ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 0.999
nikQ
Nickel transport protein NikQ.
 
 0.999
ecfT
Energy-coupling factor transporter transmembrane protein.
  
 0.995
T45_00048
Hypothetical protein.
  
 0.980
cbiH
cobalt-precorrin-3B C(17-methyltransferase.
  
  
 0.955
cobK
precorrin-6A reductase.
 
  
 0.894
T45_02439
Streptomyces sporulation and cell division protein.
       0.772
ohrR_1
Organic hydroperoxide resistance transcriptional regulator.
       0.705
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
  
 
 0.702
cobL_1
precorrin-6Y C(5,15)-methyltransferase.
  
 
 0.693
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.