STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbpA_3Penicillin-binding protein A. (562 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
 
 
 0.935
ftsW_2
Lipid II flippase FtsW; Belongs to the SEDS family.
 
 
 0.834
ftsW_3
Lipid II flippase FtsW; Belongs to the SEDS family.
 
 
 0.813
ftsW_1
Lipid II flippase FtsW; Belongs to the SEDS family.
 
 
 0.811
mreC
Cell shape-determining protein MreC precursor; Involved in formation and maintenance of cell shape.
 
 
 0.788
pbpF
Penicillin-binding protein 1F.
 
 
 0.750
ponA1_1
Penicillin-binding protein 1A.
   
 0.700
ponA1_2
Penicillin-binding protein 1A.
 
 
 0.694
mreB_1
Rod shape-determining protein MreB.
 
 
 
 0.650
pbpG
Penicillin-binding protein 2D.
   
 0.646
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.