STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galE_1UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (321 aa)    
Predicted Functional Partners:
galT
Galactose-1-phosphate uridylyltransferase.
  
 0.999
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
 0.995
gtaB_2
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.953
gtaB_1
UTP--glucose-1-phosphate uridylyltransferase.
 
  
 0.950
ywqF
UDP-glucose 6-dehydrogenase YwqF.
 
 
 0.933
galE_2
UDP-glucose 4-epimerase.
  
 0.903
galE_4
UDP-glucose 4-epimerase.
  
  
 
0.900
strE
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
0.890
T45_00502
3 beta-hydroxysteroid dehydrogenase/delta 5-->4-isomerase.
  
 0.868
chmD
DTDP-4-oxo-6-deoxy-D-allose reductase.
  
 0.820
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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