STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02476Fatty acid desaturase. (337 aa)    
Predicted Functional Partners:
kstR2_2
HTH-type transcriptional repressor KstR2.
     
 0.924
desA3
stearoyl-CoA 9-desaturase.
   
 0.917
T45_04622
stearoyl-CoA 9-desaturase electron transfer.
     
 0.907
T45_03244
Fatty acid desaturase.
   
 0.860
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
     
 0.781
hmp_4
3-ketosteroid-9-alpha-hydroxylase reductase.
     
 0.781
pobB
Phenoxybenzoate dioxygenase subunit beta.
     
 0.781
pht2
Phthalate 4,5-dioxygenase oxygenase reductase.
     
 0.781
T45_06351
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.738
pksN
Polyketide synthase PksN; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 
 0.725
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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