STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02490Hypothetical protein. (298 aa)    
Predicted Functional Partners:
T45_02051
Hypothetical protein.
  
   
 0.918
T45_02489
Hypothetical protein.
 
     0.863
T45_00557
Hypothetical protein.
  
     0.763
T45_06617
Hypothetical protein.
     
 0.762
T45_06557
Hypothetical protein.
  
     0.754
surA
Chaperone SurA.
 
     0.750
T45_02488
SMI1 / KNR4 family protein.
       0.741
T45_01251
Hypothetical protein.
  
     0.735
T45_08938
Hypothetical protein.
  
     0.725
T45_08640
Hypothetical protein.
  
     0.723
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.