Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
T45_02525GDSL-like Lipase/Acylhydrolase. (347 aa)    
Predicted Functional Partners:
T45_06173
Endoglucanase E1 precursor.
   
 0.793
engD
Endoglucanase D precursor; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
   
 0.793
xynAS9_4
Endo-1,4-beta-xylanase A precursor.
   
 0.771
thlA_1
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.718
T45_02523
Hypothetical protein.
       0.628
T45_03899
Hypothetical protein.
  
     0.615
cbs_1
Putative cystathionine beta-synthase.
       0.591
T45_06061
Hypothetical protein.
  
     0.527
T45_08092
Hypothetical protein.
  
     0.506
pelA_2
Pectate trisaccharide-lyase precursor.
    
 0.503
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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