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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bphC_1Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase. (334 aa)    
Predicted Functional Partners:
scpA_1
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.903
mutB_2
methylmalonyl-CoA mutase large subunit.
    
 0.886
bphC_2
Manganese-dependent 2,3-dihydroxybiphenyl 1,2-dioxygenase.
 
 
 
0.883
mutA
methylmalonyl-CoA mutase small subunit.
    
 0.877
mutB_1
methylmalonyl-CoA mutase large subunit.
    
 0.877
T45_02537
Carboxymuconolactone decarboxylase family.
       0.848
tfdB_1
2,4-dichlorophenol 6-monooxygenase.
    
 0.847
tfdB_2
2,4-dichlorophenol 6-monooxygenase.
    
 0.847
serA_3
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.847
hsaB_2
Flavin-dependent monooxygenase, reductase subunit.
  
 
 0.839
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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