Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_02554Choline dehydrogenase. (501 aa)    
Predicted Functional Partners:
T45_02555
tRNA-specific adenosine deaminase.
       0.801
iolE_1
Inosose dehydratase.
       0.801
cycB
Cyclodextrin-binding protein precursor.
       0.756
lacF_4
Lactose transport system permease protein LacF.
       0.756
T45_02548
Hypothetical protein.
   
  0.745
korA
2-oxoglutarate oxidoreductase subunit KorA.
     
  0.740
vgb_2
Virginiamycin B lyase.
  
 
 0.708
gntK
Thermoresistant gluconokinase.
     
 0.676
pobB
Phenoxybenzoate dioxygenase subunit beta.
 
  
 0.666
T45_04050
Ankyrin repeats (3 copies.
   
 0.651
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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