Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ndhFNicotinate dehydrogenase FAD-subunit. (299 aa)    
Predicted Functional Partners:
cutS_1
Carbon monoxide dehydrogenase small chain.
 0.995
pucD_1
Putative xanthine dehydrogenase subunit D.
 0.987
cutS_4
Carbon monoxide dehydrogenase small chain.
 0.968
xdhA_4
Xanthine dehydrogenase molybdenum-binding subunit.
 0.967
cutS_3
Carbon monoxide dehydrogenase small chain.
 0.963
pucD_2
Putative xanthine dehydrogenase subunit D.
 0.942
cutS_2
Carbon monoxide dehydrogenase small chain.
 0.934
iorA_1
Isoquinoline 1-oxidoreductase subunit alpha.
 0.921
iorA_2
Isoquinoline 1-oxidoreductase subunit alpha.
 0.893
xdhA_2
Xanthine dehydrogenase molybdenum-binding subunit.
 0.872
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.