Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
T45_02571Carbohydrate diacid transcriptional activator. (560 aa)    
Predicted Functional Partners:
ndhF
Nicotinate dehydrogenase FAD-subunit.
 
     0.785
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
  0.743
barA_2
Signal transduction histidine-protein kinase.
    
  0.743
cutS_1
Carbon monoxide dehydrogenase small chain.
       0.714
pucD_1
Putative xanthine dehydrogenase subunit D.
 
     0.642
pbuG_1
Guanine/hypoxanthine permease PbuG.
       0.632
T45_04753
Purine catabolism regulatory protein-like family protein.
  
     0.592
T45_03327
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.567
T45_01938
Hypothetical protein.
  
     0.521
T45_02572
Hypothetical protein.
       0.519
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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