STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T45_02579Hypothetical protein. (425 aa)    
Predicted Functional Partners:
T45_02117
Hypothetical protein.
  
     0.692
T45_03481
Hypothetical protein.
  
     0.688
T45_03994
Cell wall synthesis protein Wag31.
  
     0.688
T45_05960
Hypothetical protein.
  
     0.661
T45_01355
Metallopeptidase family M24.
  
     0.659
T45_08986
Hypothetical protein.
  
     0.652
T45_00557
Hypothetical protein.
  
    0.636
T45_02163
DNA-binding transcriptional repressor FabR.
  
     0.631
T45_04228
Putative peptidoglycan binding domain protein.
  
     0.615
T45_07664
Bacterial regulatory proteins, tetR family.
  
     0.603
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.