Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
bcpACarboxyvinyl-carboxyphosphonate. (287 aa)    
Predicted Functional Partners:
aceB
Malate synthase; Belongs to the malate synthase family.
   
 0.939
T45_01043
Citrate synthase.
  
 0.920
gltA2
Citrate synthase 1; Belongs to the citrate synthase family.
  
 0.920
citA
Citrate synthase 1; Belongs to the citrate synthase family.
  
 0.920
fumA
Fumarate hydratase class I, aerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.878
ydaP
Putative thiamine pyrophosphate-containing; Belongs to the TPP enzyme family.
  
 
 0.877
poxB
Pyruvate dehydrogenase [ubiquinone]; Belongs to the TPP enzyme family.
  
 
 0.877
pucG
Purine catabolism protein PucG.
  
 
 0.841
accA
Acetyl-coenzyme A carboxylase carboxyl.
    
 0.837
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
  0.829
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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