Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lrpC_1HTH-type transcriptional regulator LrpC. (155 aa)    
Predicted Functional Partners:
lrp_2
Leucine-responsive regulatory protein.
  
    0.794
cobB_2
NAD-dependent protein deacetylase.
  
    0.684
yvhJ_3
Putative transcriptional regulator YvhJ.
   
    0.681
nasF_1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.667
korA
2-oxoglutarate oxidoreductase subunit KorA.
    
  0.626
T45_02646
Alpha/beta hydrolase family protein.
       0.615
T45_02645
Helix-turn-helix domain protein.
 
    0.611
asnC_5
Regulatory protein AsnC.
  
     0.598
T45_03917
Putative response regulatory protein/MT3230.
   
    0.564
brpA
Biofilm regulatory protein A precursor.
   
    0.539
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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