Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cmpB_2Bicarbonate transport system permease protein. (292 aa)    
Predicted Functional Partners:
ssuA_3
Putative aliphatic sulfonates-binding protein precursor.
 
 0.998
ssuB_2
Aliphatic sulfonates import ATP-binding protein.
 
 0.998
ssuA_4
Putative aliphatic sulfonates-binding protein precursor.
 
 0.983
ssuB_3
Aliphatic sulfonates import ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.976
tauB
Taurine import ATP-binding protein TauB.
 
 0.973
ssuA_1
Putative aliphatic sulfonates-binding protein precursor.
 
 0.972
ssuB_4
Aliphatic sulfonates import ATP-binding protein.
 
 0.968
ssuB_1
Aliphatic sulfonates import ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.
 
 0.966
ssuB_5
Aliphatic sulfonates import ATP-binding protein.
 
 0.966
ssuA_5
Putative aliphatic sulfonates-binding protein precursor.
 
 0.961
Your Current Organism:
Streptomyces turgidiscabies
NCBI taxonomy Id: 85558
Other names: ATCC 700248, CIP 105577, IFO 16080, JCM 10429, NBRC 16080, NRRL B-24078, S. turgidiscabies, strain SY9113
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